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Multiple injuries and one death were reported from the Pacific coastal area of Miyagi on the main Honshu island, police said according to media, and TV footage showed widespread flooding in the area.
At least six fires were reported in Tokyo, where the subway system stopped, sirens wailed and people streamed out of buildings.
The first quake struck about 382 kilometres northeast of Tokyo, the U.S. Geological Survey said, revising the magnitude from an earlier 7.9.
It also put the territories of Guam, the Philippines, the Marshall Islands, Indonesia, Papua New Guinea, Nauru, Micronesia and Hawaii under a lower tsunami watch.
Small quakes are felt every day somewhere in Japan and people take part in regular drills at schools and workplaces to prepare for a calamity.
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